Sunday, May 22, 2011

Vacation Week/Projects!!!!

  This week we finally began our research projects. There was a wide assortment of research topics chosen by each group. Several students woke up early to work in the field at low tide, including some mornings that started before 4:00am. It was difficult for a few groups to get started. Some groups had difficulty obtaining the materials required for their project. Other groups had trouble acquiring the specimens they needed. However, a few lucky groups were able to begin right away without any impediments. 

Below is a list of all the groups and a brief overview of each project: 

Sarah Vojnovich, Alex Gulick, and Kelsey McCoy, are studying the social interactions of the saddleback clownfish, Amphiprion polymnus. Their project examines the behavioral changes of a female when placed in a tank with different numbers of males.

Cynthia Sells is working with previously collected data sets estimating biomass of local infauna and benthic organisms. Biomass at each trophic level is important to know when creating food webs that depict the ecological interactions between organisms.

Karl Biederbeck is performing a behavioral study on the sea star, Pisaster ochraceus. Desiccation is an important factor that sets the upper limits of many intertidal species. Sea stars behaviorally avoid desiccation by staying in the low zone. Karl’s project focuses on whether or not sea stars will move higher in the intertidal if the only available food source is located in an area that is above the normal range of a sea star. 

Stephen Nelson and Paul Dixson are also working with Pisaster ochraceus. Their project involves the juxtaposition of a lab experiment and an observational study. The lab experiment is a feeding trial examining prey preference patterns between the different color polymorphs of P. ochraceus. The observational study consists of performing field surveys to determine whether there is a difference in diet between the colors in the field.


Allan Chan and Steven Van Auken are working with their favorite invertebrate Cryptochiton stelleri, the gumboot chiton! Their research project consists of a lab experiment that involves six C. stelleri and a magnetic field produced by a Helmholtz Coil (borrowed from Jim Ketter of the OSU physics department). The lab experiment is to examine the effects of a magnetic field (Earth’s and an externally applied field) on C. stelleri’s movement because like most chitons, they have a radula that contains magnetite. Recording equipment was used in the experiment and was borrowed from Thomas Hurst in the NOAA department.


Casey Pollock and Erin Bruce are examining pipefish habitat preference, specifically if they change color to match the surroundings of their selected habitat. In order to collect the specimens needed they went seining to collect pipefish on multiple occasions. (The sein was borrowed from Wade Smith of the Department of Fish and Wildlife).


Amanda Brunner, Emily Pickering, and Lisa Neyman are working with the snail, Littorina sitkana. It has a trait-mediated response to an alarm signal given off by the mutilated flesh of killed individuals of the same species rather than the actual presence of the predator. They are testing to see if they will respond to the flesh of other dead species: another Littorina species, Lottia persona (a limpet), and Mytilus calfornianus, the California mussel.

Melissa Errend and Wendel Raymond are studying the effects of a simulated sculpin extinction among metapopulations. They removed all sculpin from several artificially created tidepools, made from a previous study, and are observing what fishes colonize those tidepools.


Vathani Logendran, Cela Sibley, and Jessie Johnson are working with juvenile Dungeness crabs, Cancer magister. Their project involves tethering juvenile crabs in both high and low areas of the mud flats and observing the predation rates. 

Reed Norton is working with walleye Pollock and determining the effects of ocean acidification on size at hatching. Climate change is affecting the pH of the oceans' waters. This has numerous ecological ramifications. The impacts of changing pH levels are being studied by several organizations. Reed is working in conjunction with NOAA.

It was a pretty relaxing week or a very busy week, depending on the intensity of each groups’ project. Some groups finished data collection by Sunday but a few projects are still ongoing. Overall it was a fun week working in our areas of interest. We played volleyball almost every day and even had a barbeque on Thursday, which was delicious!


Monday, May 16, 2011

Excel, Minitab, Powerpoint, and... VOLLEYBALL!

Monday 5/9
While some of us decided to sleep in, most of the class rolled out of bed to meet their group at the library by 9:00am to begin working on our data reports. As we opened our folders filled with data, many of us were "a bit" overwhelmed with the formatting, entry, and all around insane amount of data we had to work with. An hour into plugging numbers, we made our way to the lecture room to listen to our Laura give her talk, Structure and Dynamics: Communities to Meta-Ecosystems.

Laura, prepping for lecture

In this lecture we learned about some of the different models that help describe community and ecosystem structure, such as the Menge-Sutherland environmental stress model and the meta-ecosystem model. 


Back to the lecture room!

The rest of the day was filled with data entry and analysis, broken up with a special guest lecture by Jeremy Rose, titled Ecological impacts of ocean acidification. Jeremy's lecture gave us all a detailed insight to ocean acidification, specifically how it affects the Pacific Northwest.


Tuesday 5/10
With the deadline quickly approaching, everyone began cracking down on their projects. After a bit of planning and outlining in the morning, we had our final community ecology lecture from Laura, Species Diversity and Stability in Marine Communities.
Reed and Stephen, playing close attention to lecture...

Some of the highlights of this lecture were when we learned about the different spatial scales on which diversity is acted upon, such as local and regional. Examples of factors that influence diversity locally are species interactions and nutrient availability. Regional diversity is considered more of a reflection of the species available, compared to their interactions.

Almost done with lecture!

 Despite the daunting amounts of Excel files full of data to still be analyzed, the majority of us decided to take over the volleyball court before the "outsiders-with-PhDs-who-insisted-on-building-a-fence-to-keep-the-pokies-out-of-their-feet" invaded our turf.

The fence

After about two hours of "music that robots would listen to" and total domination in our "homeslice," we were practically "prosauce." To wrap up the relaxation time for the day, a large group marched over to Rogue Brewery, decked out in their Hawaiian attire, in search of free beer. Feeling good, we all reconvened back in the library conference room to listen to none other than our New Zealander neighbor, Leigh Tait. He discussed his PhD work, Light competition and algal productivity. Leigh's talk focused on the benefits of increased biodiversity, including greater ecosystem production and stability. His research consisted of the synergistic response between canopy and sub-canopy plots of inter tidal algal species in New Zealand. He explained how light delivery is a complex process, and its use in productivity dynamics are different in complex assemblages. We finished off the night with a last-minute meeting for our projects, and hit the sack anticipating our presentations tomorrow.


Wednesday 5/11
After spending hours in the library staring at graph after graph of intertidal data, all our work had finally come together. We kicked off the morning with two presentations describing the community structure and site-level biodiversity at Boiler Bay and Strawberry Hill.

Wendel, Lisa, and Jessie presenting their data

Then came our typical break for coffee and donuts in the staff lounge, only this time it was even more eventful. Today was Casey's 21st birthday, and who better to share a birthday with than Dr. George Boehlert, the director of HMSC (marking his 21 + a few years birthday)! A birthday song was sung by all, and before long it was time to return to the lecture room to finish off the last two presentations.

Coedine anyone?

After listening to the final groups discuss tide pool diversity and predator diets, it was time to eat. While Casey took her usual nap for the day, Sarah and Stephen joined forced in the tiny kitchen of Winton to begin the secret birthday preparation. After hours and hours (okay maybe just a little over an hour) of slaving over a beautiful cake and chocolate cookies, the goodies were taken to the lecture hall to set up. Thanks to Erin's sneaky distraction, all went as planned. Casey was both surprised and delighted to walk into the community ecology review session, only to be greeted with sweets and birthday song.



High on sugar, we made it through the review and were let loose for independent study. This consisted of another adventure to Rogue, where the group met yet another surprise, Casey's mom! We shared a few drinks and munchies while Casey opened gifts. The group wrapped up the night with a beautiful walk back to the HMSC campus and a night full of community ecology review.
Note: As co-author of this section, I, Casey Pollock, would like to send out a HUGE THANK YOU to everyone at Hatfield for making my birthday an absolute blast. I couldn't have asked for a better group to spend it with. You guys are awesome!


Thursday 5/12
Another beautiful day in Newport, right on time for our community ecology final. Just like every other test day, the sun and blue sky came out to tease us. Despite the distractions, we powered through the study day and finished any final touches on our organization. It was a relief for most to find out that the test was open-note. Once we were all done ace-ing the exam, we celebrated with a few hours of volleyball in the sunshine. It was great to see the entire class come together to play, and the additional "beverage of choice" on the rotational break made it worth the wait.

Our wonderful Professor, Laura, and TA, Dafne!

When dinner time rolled around, we all indulged in our homemade pizzas, thanks to Stephen and his crust making magic. Our picnic took place in the covered seating area, where we were joined by Laura and Dafne. To conclude the night, some of the group ventured down the street to Hoovers for an end-of-the-section/Casey's 21er celebration.

Details omitted.


Friday 5/13
Friday morning meetings at 9am... ouch. Dragging our feet, we met in the lecture room for the last time this week, greeted by Sally (she's back!) and Sarah Henkel. We discussed the syllabus for the remaining weeks and eventually broke off for individual consultations. Once the meetings were out, it was a race against the clock to get our proposals written by 5pm. When the deadline rolled around, our emails were sent, full of literature search results and research outlines. The rest of the week was ours to start on our projects (or not) and get some well deserved rest. Congrats to everyone for getting through another section of the program. Whether you like it or not, there's only three weeks left to go. Let's make the best of it, and maybe try to get some work done here and there.

Cheers!

Sunday, May 8, 2011

Good Morning Intertidal!

Monday 5/2
After a restful weekend we started the community ecology section. We met our new professor Laura Petes and teaching assistant Dafne Eerkes-Medrano. Bruce Menge and some of his lab techs came by for a visit too. The next two weeks look really exciting! We are going to spend a lot of time in the field collecting data. We are going to have to put what we learned in the invertebrate, fish and algae sections to the test so that we can collect accurate data. The class has been divided into two person field teams that will collect specific data during our upcoming field trips. We will then analyze the data, and next week, present our findings.

Today we had two lectures. The first was a general overview of marine ecology with a review of data that we may encounter over the next two weeks. Second, Dafne gave a lecture on her PhD thesis work. She has been studying the effects hypoxia on the larval stage of many invertebrates. Tomorrow we head out to Boiler Bay at 6am for our first day of data collection!

Tuesday 5/3
Steven sleepily counts snails 
Today began with an early trip to Boiler Bay. With coffee and tea in hand, students set out at 6am in groups of two to three to either measure species abundance using Transect-Quadrats, or measure feeding and predation by two common Rocky Intertidal whelk species, Nucella ostrina and Nucella canaliculata. After four hours of thorough surveying, measurements, and observations students headed back to Hatfield to clean up and have lunch before the first lecture of the day. This lecture covered the spatial, species, size, and trophic structure and biodiversity of marine life communities in different parts of the world. After the lecture, field groups met in the library for raw data entry and analysis into excel spread sheets. The day finished off with a very interesting lecture by Sarah Close about her graduate work studying nutrient uptake, availability, and limitation in marine environments.


Wednesday 5/4
Lisa and Vathani discuss their data while Jesse looks on
We had another early start today. Instead of Boiler Bay we headed south to Strawberry Hill. We continued to collect transect-quadrat, belt transect, tidepool diversity data and feeding surveys of whelks and Pisaster ochraceaus. The weather cooperated which made the data collection much more enjoyable. When we returned to HMSC we had a lecture on how the environment effects species interactions. The lectures and field trips of this section have gotten a lot of students thinking about their research projects for later in the term. Some students began collecting species such as Cryptochiton stelleri, Pisaster ochraceaus, and others to use in their research. The rest of the afternoon was spent doing data entry, but some of us found time for volleyball.

Thursday 5/5
Happy cinco de mayo! We got to sleep in a little later today but we headed back out to the field to collect biodiversity and mobile predator data at Boiler Bay. The field teams broke into two groups. One went to Boiler Bay proper (where we have been going all term) and the other went to different part of Boiler Bay called Manipulation Bay.  Manipulation Bay got its name from being a research site for many OSU students over the years. Some students even witnessed seagulls feeding on the arms of a giant Pacific octopus (Enteroctopus dolfeni) on the rocks! The weather turned a little nasty but it was not nearly as bad as earlier in the term.

Our afternoon lecture was on complex community interactions and community structure. One of the major topics was trophic cascades. Trophic cascades are a central part of ecology. First, a trophic level is defined as the place in the food chain that an organism occupies. A trophic cascade is the phenomenon by which top predators control the abundance of their prey and therefore indirectly affect the population sizes of lower trophic levels. Picture this example food chain. Killer whales eat sea otters which eat sea urchins which eat kelp. When killer whale populations are high they directly control the population of sea otters. The low population size of otters trickles down the food chain allowing for high urchin populations and low kelp abundance.

A group of students surveying biodiversity at Strawberry Hill
Friday 5/6
Last early morning! We set out to Strawberry Hill again but this time to collect biodiversity and mobile predator data. While it has been a very long week it was sad that it would be our last class field trip to the rocky intertidal. The biodiversity surveys were completed in 10 minute increments for a total of 120 minutes of surveying. We did surveys at low, mid, and high tidal zones in both wave exposed and wave protected areas of the site.

Our afternoon lecture was short, which allowed for students to catch up on sleep, readings and data entry. Next week we will be analyzing the data we collected this week. We will present our findings to our classmates on Wednesday night.

It has been a long week for Reed

Sunday, May 1, 2011

Bring it on Algae!


MONDAY - 4/25
After an enjoyable Easter weekend filled with delicious food, friends and family, we prepared ourselves for a week of labs and lectures about algae. Monday began with the second lecture on brown algae where we learned about the morphologies of a variety of species including sacs, tubes, cylinders, crusts, and blades. Included in the lecture was a special life cycle where the species had two adult forms that were identical genetically but differed in morphologies. Following lecture, we found ourselves in lab practicing our microscope skills and discerning the difference between species based on macroscopic and microscopic differences. We used this information for our species profiles. After our process, we repeated the process with some red algaes. Did you know that red algaes are eaten by many cultures on every continent on our world? They are even used in a variety of cosmetics! After breaking for supper, some of us gathered in the lab for a review on green, brown, and simple red algae. Annette walked around to different tanks reciting the scientific names of the various taxa.

TUESDAY - 4/26
Our day started with part two of the red algae lectures. For this day, Annette taught us about the morphology and life history of red algaes. She helped us review some of the aspects of algae anatomy that tripped us up during our lab sessions including how to determine if the algae are multiaxial or uniaxial. That night found us beginning to work on our group projects. This project had the class divided into nine groups with each group assigned a particular algae morphology. For example, there were the coralline algaes, small brown algaes, and finely branched red axes. Each group was responsible for identify all their specimens and creating informational cards for four to six of their species to teach the rest of the class. This also involved creating Powerpoint slide cards that showed how to differentiate between two similar looking taxa.

 WEDNESDAY - 4/27 
Wednesday began with coffee and donuts at 10 AM, just like every morning should start! The majority of the day was committed to completing our group projects and preparing for our presentations that evening. Walking into the lab at 7 pm, we were greeted by treats provided by Annette and nine stations of slides and specimens. Annette explained to us that one of each group would remain at each station while the rest were allowed to roam, and then we switched after one hour. She and Margot each graded half of the room. Each person at the individual stations explained their own taxa to other students roaming around and asking questions. We all came to realize that the project led us to memorize the various species we had learned about in lecture and lab.

THURSDAY - 4/28
Thursday brought our final lecture. This lecture, however, brought a more personal point of view to the topic of algae because it covered Annette’s graduate work. The focus of this lecture was mainly on the effects of desiccation and herbivory of limpets on Mazzaella parksii, a common intertidal algae. It was explained to us that desiccation increases with elevation and herbivory decreases with elevation. The results showed that tetrasporophytes were more susceptible to desiccation, whereas gametophyte blades could grow in desiccation as they could hold more water, therefore outlasting the desiccation. Limpets were the focus of Annette’s herbivory studies. After many experiments, she found that the limpets preferred gametophytes over tetrasporophytes, thus increasing the relative abundance of the tetrasporophytes. In conclusion, tetrasporophytes were found more at lower elevations and near wave-exposed regions, thus being more susceptible to desiccation. Gametophytes, however, were found at higher elevations in protected areas, and therefore were preferred by limpets for grazing. The rest of day consisted of reviewing and studying for the exams that were to come the following day.

FRIDAY - 4/29
The end of the algae section was now upon us. The section had been long but our knowledge about algae was so great that it had seeped into our dreams! At 10 AM, we had our lab practical which consisted of twenty stations of various algae specimens. At each station, we answered questions about the scientific names, morphologies, and life histories of the specimens provided. Following the completion of our lab practical, we had a two hour break to eat lunch and cram as much last-minute information before the lecture final. After the completion of the lecture final, the sun greeted us for some games of volleyball and basketball, and Margot and Annette joined us!

Friday, April 22, 2011

Week 4: End of Fish and Beginning of Algae

Monday, April 18th, 2011


After working on the Marine Fishes section material Sunday, we continued to work hard all day to make sure we finished our assignments. With bloodshot eyes we stared at our lectures, notes, species profiles and research papers in hopes of doing well on the upcoming exam, but the stress did not wear us down. With the passion only a marine biologist could possess, we pressed on in pursuit of what we love. One thing that made it harder than usual to study is the unusually gorgeous weather we had Sunday, Monday, and Tuesday. The weather doesn’t always seem to cooperate when we are out in the field, but it was at its best right before our tests for both the invertebrate and fish section. Even with the sun calling us out to play, we studied all night long in preparation for our test.



Tuesday April 19th, 2011

The test has arrived! We started our day with our lab practicum. We were tested on the basic anatomy of Marine Fishes, identification of specific local species, and our abilities to correctly use a dichotomous key. After our lunch break we took our lecture based exam. We were tested on the Marine Fishes lecture material, the purpose of fish in our oceans, and their life histories through evolution. After cleaning up the lab, we enjoyed the sun the rest of the day. Of course this meant we played volleyball with Wade Smith and Margot Hessing-Lewis in the beautiful sun!

A group of the students and Wade playing volleyball after our test


Wednesday April 20th, 2011

Algae week; it’s here!!!!! After sleeping in and catching up on the much needed rest we headed to afternoon lecture to learn about algae evolution and life histories. Annette Olson and Margot Hessing-Lewis are our instructors for the Marine Algae section of the class. We also spent time in the lab looking at the specimens Annette had collected during the week. Looking the array of algae in the tanks, we came to realize that classifying algae was going to be harder than we thought. Algae are very diverse and they are hard to identify to the species level without looking at them on a cellular level. We then knew this section would require intensive work that required microscopes, time, and lots of dedication. After getting into groups for our algae project, some of the groups met with Annette to get a better picture of what we could look for on our field trip out to Boiler Bay tomorrow. We sorted specific algae into our designated tank areas and went home to prepare for our early field trip.



Thursday, April 21, 2011

 Melissa, Annette, Karol, Alex, and Jessie (Left to right)
At 7:30am with coffee in hand, we left for Boiler Bay. Five minutes later everyone’s passed out for the drive to the site, but as soon as we arrived at Boiler Bay the sun greeted us with a nice view where we could see algae covered benches that seemed to go forever. Coming here many times before with other purposes in mind we all never gave a second thought about algae but with Annette’s knowledge fresh in our minds we were ready to see what we had learned the day before. We examined the algae with our “heads down and bottoms up” as Annette would say for our specific group algae. We were guided through the slippery algae beds as Annette pointed out various species. She told us about their morphologies and various environments and conditions each type of algae lived under. After collecting all the species we needed and hearing Annette blow her sea kelp horn, we headed back to put our samples in the lab. We continued our day with a lecture and spent time in the lab identifying specific green algaes (Chlorophyta) using microscopes and dichotomous keys. After lab we went home to sleep and prepare for our next day.



Friday April 22, 2011

Our morning started with our first trip to Seal Rock. We have been to the other sites more than once, so we were all excited to visit a new site. After our leisurely hike down to the water, we began our search for more algae to add diversity to our collection. We spent most of our time practicing saying the names of the algae as Annette pointed them out. Who knew learning a new language (Latin) was going to be a dominant part of our curriculum. We did take a couple breaks to have fun-- Hatfield style. Alan and Steven jumped in a big tide pool. People with cameras took pictures with the small tidepool waterfalls and we walked along the shoreline with the small waves crashing at our feet. Once we got back to Hatfield, we put our collected algae species in our tanks and a short lunch break to fuel up. We finished our day with a lecture on the brown algae (Phylum: Phaeophyceae). We had an early afternoon dismissal to enjoy our Easter weekend.
Seal Rock